We support GitHub Enterprise with organization-owned repositories. As long as access to Organization is granted when configuring token, repositories that belong to that Organization will be accessible.
Instructions
While using Github org OAuth flow issues might happen when generating an access token.
Start by disable OAuth App access restrictions for your organization temporarily as described here. This should remove the need for organization owners to confirm authorizations.
Then, start OAuth workflow. Get organization approval requests, and click “request“. You should get the message that access was requested.
Then with an organization owner account, go to
organization setting -> Third-party access,and should see a request for approval. Once it’s approved, the access to the token created was successfully given. Should look like the below:
If you’re trying to request approval with both regular org user and org admin and you don’t still see the request on Third-party access page. We recommend reaching out to Github support to get their help with this as that process is out of our control.